BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F05SP1|AL426558
(842 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1690 1540 0.0
>3x_Contig1690
Length = 13018
Score = 1540 bits (762), Expect = 0.0
Identities = 810/842 (96%)
Strand = Plus / Plus
Query: 1 gagtggtgaattgttgaaacctggttgtatcaaatgtgttgaaaatmaaggtatgcctgt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 10467 gagtggtgaattgttgaaacctggttgtatcaaatgtgttgaaaataaaggtatgcctgt 10526
Query: 61 tgacagtcatggcaatttcggaaatttatacatcagattccgtgtgaagttcccagaaca 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10527 tgacagtaatggcaatttcggaaatttatacatcagattccgtgtgaagttcccagaaca 10586
Query: 121 gttgaaatctgatacaatcaataaactctctgamatccttgttcaagatgaaaatatatc 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10587 gttgaaatctgatacaatcaataaactctctgaaatccttgttcaagatgaaaatatatc 10646
Query: 181 cmgtattctcagtgacagtattaacmataagagctacaagataaattcttcagatatcgc 240
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 10647 cagtattctcagtgacagtattaacaataagagctacaagataaattcttcagatatcgc 10706
Query: 241 agaagagcmagtcttgagtcccttcmccmctgaagatctacaatcgamattcaaamatgc 300
|||||||| |||||||||| ||||| || |||||||||||||||||| ||||||| ||||
Sbjct: 10707 agaagagcaagtcttgagtaccttcaccactgaagatctacaatcgaaattcaaaaatgc 10766
Query: 301 taagagggattcacctaataaacgaaaacmcgctgatcgtgatggtcctcmttacmacac 360
||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 10767 taagagggattcacctaataaacgaaaacacgctgatcgtgatggtcctcattacaacac 10826
Query: 361 macatacgactacgattatmacccmacagaatcmtgtcacatgaactgaaccmcgccatt 420
|||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||
Sbjct: 10827 aacatacgactacgattataacccaacagaatcatgtcacatgaactgaaccacgccatt 10886
Query: 421 tccccgctactcataacagtcgacatatgatttcgacaatcgtgacatatgatgttgtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10887 tccccgctactcataacagtcgacatatgatttcgacaatcgtgacatatgatgttgtca 10946
Query: 481 catctatgacacgtcataacatgttatagaatacmcmttcmcttccmgggagcmtgcgtt 540
|||||||||||||||||||||||||||||||||| | ||| ||||| |||||| ||||||
Sbjct: 10947 catctatgacacgtcataacatgttatagaatacacattcacttccagggagcatgcgtt 11006
Query: 541 cacmaacttcctttaccaattcttggttaatctttttccttttctttaaccagttgtcca 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11007 cacaaacttcctttaccaattcttggttaatctttttccttttctttaaccagttgtcca 11066
Query: 601 taccatacttgcataccatcacagccttgatccttaaccmgttaccagagattcccaaca 660
||| |||||||||||| |||||||| ||||||||||||| ||||| ||||||||| ||||
Sbjct: 11067 tacaatacttgcatacaatcacagcattgatccttaaccagttacaagagattccaaaca 11126
Query: 661 ccacaattcaacctttgcattttgaaaacccgccttttcacggcctaacttgttatatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11127 ccacaattcaacctttgcattttgaaaacccgccttttcacggcctaacttgttatatat 11186
Query: 721 tattacttgtgcgtgattggctcttattaaatctccagcacctctagatggactttttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11187 tattacttgtgcgtgattggctcttattaaatctccagcacctctagatggactttttta 11246
Query: 781 cttatagaatctagaatttcaacatttctcaatctgttctctttttttttttcttctaat 840
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 11247 cttatagaatctagaatttcatcatttctcaatctgttctctttttttttttcttctaat 11306
Query: 841 ta 842
||
Sbjct: 11307 ta 11308
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,989
Number of Sequences: 1807
Number of extensions: 10989
Number of successful extensions: 317
Number of sequences better than 1.0e-20: 1
length of query: 842
length of database: 10,358,551
effective HSP length: 16
effective length of query: 826
effective length of database: 10,329,639
effective search space: 8532281814
effective search space used: 8532281814
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)